• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1042 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1042" - PFAM: NAD-dependent epimerase/dehydratase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1042PFAM- NAD-dependent epimerase/dehydratase; KEGG- neu-NE0595 putative oxidoreductase protein (301 aa)    
Predicted Functional Partners:
Neut_1041
PFAM- ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG- neu-NE0594 CDP-6-deoxy-delta-3,4-glucoseen reductase (348 aa)
   
   
  0.753
Neut_1043
PFAM- type II secretion system protein; KEGG- neu-NE0596 bacterial type II secretion system protein (406 aa)
              0.652
Neut_0618
Mannose-6-phosphate isomerase, type 2; KEGG- neu-NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM- mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM- mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein (483 aa)
   
   
  0.651
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
   
 
  0.595
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family (203 aa)
   
      0.586
Neut_1044
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (286 aa)
   
        0.549
yacG
DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase (64 aa)
 
          0.511
Neut_1549
N-acetylneuraminate synthase; PFAM- CBS domain containing protein; Xylose isomerase domain protein TIM barrel; N-acetylneuraminic acid synthase, N-terminal domain; KEGG- neu-NE1570 type III antifreeze protein-CBS domain-NeuB family (749 aa)
   
   
  0.485
Neut_0434
PFAM- HpcH/HpaI aldolase; KEGG- neu-NE1687 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase protein; Belongs to the HpcH/HpaI aldolase family (253 aa)
 
      0.482
Neut_0226
PFAM- UDP-glucose/GDP-mannose dehydrogenase; KEGG- neu-NE2276 UDP-glucose/GDP-mannose dehydrogenase family; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family (424 aa)
   
 
  0.481
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (8%) [HD]