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STRINGSTRING
Neut_1050 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1050" - PFAM: Redoxin domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1050PFAM- Redoxin domain protein; KEGG- neu-NE0780 hypothetical protein (185 aa)    
Predicted Functional Partners:
Neut_1051
Inositol-1-monophosphatase; PFAM- inositol monophosphatase; KEGG- neu-NE0781 myo-inositol-1(or 4)-monophosphatase (267 aa)
   
        0.895
rpmI
PFAM- ribosomal protein L35; KEGG- neu-NE0956 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
     
        0.760
Neut_1049
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (253 aa)
              0.718
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
   
   
  0.715
Neut_1393
PFAM- protein of unknown function DUF477; KEGG- neu-NE0915 hypothetical protein (294 aa)
     
        0.707
Neut_1175
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG- neu-NE2303 uncharacterized NAD(FAD)-dependent dehydrogenase (507 aa)
     
   
  0.676
argA
TIGRFAM- amino-acid N-acetyltransferase; PFAM- GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG- neu-NE0778 GCN5-related N-acetyltransferase-aspartokinase superfamily; Belongs to the acetyltransferase family. ArgA subfamily (444 aa)
              0.653
Neut_2366
PFAM- alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG- neu-NE2465 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen (187 aa)
   
 
  0.628
Neut_0805
PFAM- ribulose bisphosphate carboxylase, small chain; KEGG- nha-Nham_4333 ribulose bisphosphate carboxylase, small chain (108 aa)
 
        0.598
Neut_2478
TIGRFAM- thioredoxin; PFAM- Thioredoxin domain; KEGG- neu-NE1034 thioredoxin; Belongs to the thioredoxin family (108 aa)
     
 
  0.522
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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