• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1054 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1054" - Putative NrfJ in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1054Putative NrfJ; Similar to Wolinella succinogenes NrfJ encoded by GenBank Accession Number AJ245540; KEGG- neu-NE0784 putative (AJ245540) NrfJ [Wolinella succinogenes] (111 aa)    
Predicted Functional Partners:
Neut_1053
KEGG- neu-NE0783 hypothetical protein (579 aa)
 
          0.793
Neut_1681
KEGG- neu-NE1504 hypothetical protein (461 aa)
   
          0.584
Neut_2522
PFAM- porin, Gram-negative type; KEGG- neu-NE2563 general diffusion gram-negative porins (413 aa)
   
          0.526
Neut_1183
TIGRFAM- Twin-arginine translocation pathway signal; PFAM- transglutaminase domain protein; KEGG- neu-NE0851 transglutaminase-like superfamily (368 aa)
   
          0.521
Neut_0264
KEGG- neu-NE0179 hypothetical protein (228 aa)
   
          0.494
Neut_1105
PFAM- diacylglycerol kinase, catalytic region; KEGG- neu-NE0804 DAG-kinase catalytic domain (presumed) (333 aa)
   
          0.428
Neut_0437
PFAM- O-antigen polymerase; KEGG- neu-NE1682 possible transmembrane protein (405 aa)
   
          0.423
Neut_2313
PFAM- copper resistance D domain protein; KEGG- neu-NE2058 cytochrome c, class IC-cytochrome c, class I (714 aa)
   
          0.407
Neut_0977
KEGG- neu-NE1275 hypothetical protein (228 aa)
   
          0.407
Neut_1052
PFAM- multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG- neu-NE0782 putative periplasmic cell division protein (SufI) (528 aa)
              0.402
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (10%) [HD]