• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1064 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1064" - PFAM: TspO/MBR family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1064PFAM- TspO/MBR family protein; KEGG- csa-Csal_0168 TspO and MBR like proteins (165 aa)    
Predicted Functional Partners:
Neut_1063
Pyrimidine dimer DNA glycosylase / DNA-(Apurinic or apyrimidinic site) lyase; KEGG- neu-NE2427 pyrimidine dimer DNA glycosylase (146 aa)
              0.854
Neut_1065
KEGG- sdn-Sden_3021 integrase, catalytic region (49 aa)
              0.707
Neut_1969
PFAM- Catalase domain protein; KEGG- neu-NE1886 catalase; Belongs to the catalase family (485 aa)
   
   
  0.678
Neut_1032
PFAM- glutamine amidotransferase class-I; KEGG- neu-NE0585 hypothetical protein (237 aa)
   
        0.527
Neut_1066
PFAM- transposase IS3/IS911 family protein; KEGG- lpf-lpl1584 hypothetical protein (98 aa)
              0.468
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family (178 aa)
       
      0.441
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
   
        0.440
atpA2
ATP synthase subunit alpha 2; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit; Belongs to the ATPase alpha/beta chains family (516 aa)
       
      0.436
atpA1
ATP synthase subunit alpha 1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit; Belongs to the ATPase alpha/beta chains family (513 aa)
       
      0.436
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (22%) [HD]