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STRINGSTRING
Neut_1088 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1088" - KEGG: neu:NE0790 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1088KEGG- neu-NE0790 hypothetical protein (166 aa)    
Predicted Functional Partners:
Neut_1087
PFAM- peptidase C39, bacteriocin processing; KEGG- neu-NE0789 hypothetical protein (230 aa)
 
          0.906
Neut_1089
KEGG- neu-NE0791 hypothetical protein (444 aa)
 
          0.904
Neut_1086
KEGG- neu-NE0788 hypothetical protein (122 aa)
 
          0.877
Neut_0178
KEGG- neu-NE0494 hypothetical protein (111 aa)
   
          0.763
Neut_0906
KEGG- neu-NE1790 hypothetical protein (373 aa)
   
          0.762
Neut_2062
KEGG- neu-NE0458 hypothetical protein (698 aa)
   
          0.760
Neut_2116
KEGG- neu-NE2270 hypothetical protein (326 aa)
   
          0.755
Neut_2051
KEGG- neu-NE1735 putative sulfonate binding protein precursor (358 aa)
   
          0.753
Neut_2219
CRISPR-associated protein, Csm4 family; KEGG- neu-NE0120 hypothetical protein (322 aa)
   
          0.743
Neut_0905
KEGG- neu-NE1791 hypothetical protein (315 aa)
   
          0.741
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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