STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1092PFAM: glycosyl transferase, group 1; KEGG: neu:NE0794 glycosyl transferase group 1. (406 aa)    
Predicted Functional Partners:
Neut_0912
PFAM: O-antigen polymerase; KEGG: neu:NE2016 hypothetical protein.
 
    0.780
Neut_0482
KEGG: neu:NE1634 hypothetical protein.
  
    0.774
Neut_0897
KEGG: neu:NE1799 hypothetical protein.
 
     0.766
Neut_0898
PFAM: glycosyl transferase, group 1; KEGG: neu:NE1798 glycosyl transferase group 1.
 
     0.761
Neut_1097
KEGG: neu:NE0796 possible CapK protein.
 
     0.759
Neut_0481
Hpr(Ser) kinase/phosphatase; KEGG: neu:NE1635 hypothetical protein.
  
     0.752
Neut_0899
TIGRFAM: eight transmembrane protein EpsH; KEGG: neu:NE1797 hypothetical protein.
 
     0.752
Neut_0896
PFAM: polysaccharide deacetylase; KEGG: neu:NE1800 polysaccharide deacetylase.
 
     0.744
Neut_1763
Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0377 sensory transduction histidine kinase.
  
     0.739
Neut_1093
PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: tbd:Tbd_0961 UDP-glucose dehydrogenase.
  
  
 0.734
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.