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STRINGSTRING
Neut_1098 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1098" - PFAM: Exopolysaccharide synthesis, ExoD in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1098PFAM- Exopolysaccharide synthesis, ExoD; KEGG- neu-NE0797 hypothetical protein (206 aa)    
Predicted Functional Partners:
Neut_2120
PFAM- lipopolysaccharide biosynthesis; KEGG- neu-NE2280 chain length determinant protein (747 aa)
           
  0.544
Neut_0500
TIGRFAM- methionine synthase; PFAM- dihydropteroate synthase, DHPS; homocysteine S-methyltransferase; Methionine synthase, B12-binding module, cap domain protein; Vitamin B12 dependent methionine synthase, activation region; cobalamin B12-binding domain protein; KEGG- neu-NE1623 MetH methionine synthase I, cobalamin-binding domain (1237 aa)
           
  0.536
Neut_1099
KEGG- neu-NE0798 hypothetical protein (159 aa)
              0.425
Neut_1090
PFAM- protein of unknown function DUF442; KEGG- neu-NE0792 hypothetical protein (176 aa)
   
          0.415
Neut_0598
TIGRFAM- diguanylate cyclase; PFAM- GGDEF domain containing protein; KEGG- neu-NE0440 domain of unknown function, DUF9 (491 aa)
   
          0.403
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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