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STRINGSTRING
Neut_1114 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1114" - PFAM: Stringent starvation protein B in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1114PFAM- Stringent starvation protein B; KEGG- neu-NE0813 putative stringent starvation protein B (142 aa)    
Predicted Functional Partners:
Neut_1113
PFAM- glutaredoxin; Glutathione S-transferase, N-terminal domain; KEGG- neu-NE0812 putative transcription modulator protein (199 aa)
 
   
  0.980
Neut_1112
PFAM- cytochrome c1; KEGG- neu-NE0811 cytochrome c1 (234 aa)
 
          0.804
Neut_1111
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (415 aa)
         
  0.786
Neut_1110
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (201 aa)
              0.770
clpX
ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (427 aa)
       
 
  0.735
ftsB
Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic (93 aa)
   
          0.653
bamE
Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (160 aa)
   
        0.651
Neut_0645
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane complex involved in electron transport (218 aa)
   
          0.606
apaH
Bis(5’-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (266 aa)
   
          0.585
Neut_1427
KEGG- neu-NE1137 putative DNA polymerase III (delta subunit) protein; TIGRFAM- DNA polymerase III, delta subunit; PFAM- DNA polymerase III, delta (357 aa)
   
          0.584
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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