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Neut_1125 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1125" - Phage integrase family protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1125Phage integrase family protein (393 aa)    
Predicted Functional Partners:
Neut_0778
DNA polymerase I (906 aa)
         
  0.609
Neut_0540
Restriction modification system DNA specificity subunit (422 aa)
   
   
  0.544
Neut_1121
Hypothetical protein (516 aa)
 
          0.541
Neut_0125
Phage transcriptional regulator, AlpA (70 aa)
 
          0.530
Neut_0394
DNA protecting protein DprA (373 aa)
 
          0.499
hisS
histidyl-tRNA synthetase (421 aa)
     
      0.481
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (519 aa)
         
  0.472
Neut_1124
Hypothetical protein (78 aa)
              0.446
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (329 aa)
     
        0.431
Neut_1330
Binding-protein-dependent transport system inner membrane protein (261 aa)
     
        0.430
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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