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Neut_1149 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1149" - KEGG: neu:NE0690 possible transmembrane protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1149KEGG- neu-NE0690 possible transmembrane protein (798 aa)    
Predicted Functional Partners:
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
 
  0.752
Neut_1806
PFAM- Fimbrial assembly family protein; KEGG- neu-NE2315 putative type 4 fimbrial biogenesis protein PilN (203 aa)
 
   
  0.747
Neut_0393
PFAM- Peptidoglycan-binding LysM; KEGG- neu-NE1969 LysM motif (342 aa)
   
     
  0.737
Neut_1779
KEGG- neu-NE2325 possible transmembrane protein (127 aa)
   
          0.729
Neut_1804
PFAM- Pilus assembly protein, PilQ; KEGG- neu-NE2313 putative type 4 fimbrial biogenesis protein PilP (175 aa)
 
          0.727
Neut_1805
PFAM- Pilus assembly protein, PilO; KEGG- neu-NE2314 putative fimbrial type-4 assembly membrane transmembrane protein (216 aa)
 
   
  0.714
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (277 aa)
              0.686
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family (374 aa)
              0.684
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (399 aa)
              0.678
trpF
PFAM- N-(5’phosphoribosyl)anthranilate isomerase (PRAI); KEGG- neu-NE0692 N-(5’phosphoribosyl)anthranilate isomerase (PRAI); Belongs to the TrpF family (208 aa)
              0.678
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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