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STRINGSTRING
Neut_1212 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1212" - PFAM: Integrase, catalytic region in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Cooccurence
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[Homology]
Score
Neut_1212PFAM- Integrase, catalytic region; KEGG- nwi-Nwi_2917 integrase, catalytic region (324 aa)    
Predicted Functional Partners:
Neut_1213
KEGG- neu-NE0879 esterase/lipase/thioesterase family active site-lipase (class 3) (388 aa)
              0.845
purD
Phosphoribosylamine--glycine ligase; KEGG- neu-NE0877 phosphoribosylglycinamide synthetase; TIGRFAM- phosphoribosylamine--glycine ligase; PFAM- phosphoribosylglycinamide synthetase; Belongs to the GARS family (432 aa)
              0.513
purH
Bifunctional purine biosynthesis protein PurH; KEGG- neu-NE0876 probable phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclodydrolase transmembrane protein; TIGRFAM- phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM- AICARFT/IMPCHase bienzyme; MGS domain protein (520 aa)
              0.405
Neut_1209
DNA-binding protein Fis; PFAM- helix-turn-helix, Fis-type; KEGG- neu-NE0875 probable factor-for-inversion-stimulation transcription regulator protein; Belongs to the transcriptional regulatory Fis family (80 aa)
              0.402
dusB
tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family (337 aa)
              0.402
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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