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Neut_1213 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1213" - KEGG: neu:NE0879 esterase/lipase/thioesterase family active site:lipase (class 3) in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1213KEGG- neu-NE0879 esterase/lipase/thioesterase family active site-lipase (class 3) (388 aa)    
Predicted Functional Partners:
Neut_1212
PFAM- Integrase, catalytic region; KEGG- nwi-Nwi_2917 integrase, catalytic region (324 aa)
              0.845
Neut_2228
CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette (95 aa)
   
          0.742
Neut_2225
TIGRFAM- CRISPR-associated protein, NE0113 family; KEGG- neu-NE0113 hypothetical protein (376 aa)
   
          0.734
Neut_1088
KEGG- neu-NE0790 hypothetical protein (166 aa)
   
          0.722
Neut_0906
KEGG- neu-NE1790 hypothetical protein (373 aa)
   
          0.715
Neut_1035
PFAM- phage integrase family protein; lipopolysaccharide biosynthesis; KEGG- neu-NE0588 phage integrase-chain length determinant protein (660 aa)
   
          0.705
Neut_2219
CRISPR-associated protein, Csm4 family; KEGG- neu-NE0120 hypothetical protein (322 aa)
   
          0.696
Neut_2116
KEGG- neu-NE2270 hypothetical protein (326 aa)
   
          0.695
Neut_0905
KEGG- neu-NE1791 hypothetical protein (315 aa)
 
        0.693
Neut_0178
KEGG- neu-NE0494 hypothetical protein (111 aa)
   
          0.690
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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