STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1214Hypothetical protein; KEGG: pol:Bpro_2073 TPR repeat. (195 aa)    
Predicted Functional Partners:
Neut_1694
PFAM: fatty acid desaturase; KEGG: rso:RS01923 putative omega-3 fatty acid desaturase transmembrane protein.
  
     0.660
Neut_1215
SMART: helicase c2; KEGG: neu:NE0880 probable ATP-dependent DNA helicase-related protein.
       0.609
Neut_1033
KEGG: neu:NE0586 hypothetical protein.
  
     0.586
Neut_2062
KEGG: neu:NE0458 hypothetical protein.
  
     0.574
Neut_1863
KEGG: sth:STH2472 hypothetical protein.
  
     0.567
Neut_0938
PFAM: WD40 domain protein beta Propeller; KEGG: neu:NE1761 hypothetical protein.
 
     0.566
Neut_1367
KEGG: sty:STY3192 hypothetical protein.
  
     0.453
Neut_0701
KEGG: neu:NE0823 TPR repeat.
  
     0.452
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.448
lptD
Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
     
 0.425
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.