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STRINGSTRING
Neut_1251 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1251" - PFAM: response regulator receiver in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1251PFAM- response regulator receiver; helix-turn-helix, Fis-type; KEGG- neu-NE1313 response regulator receiver domain-helix-turn-helix fis-type (177 aa)    
Predicted Functional Partners:
Neut_1250
Periplasmic sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG- neu-NE1314 probable two-component sensor (432 aa)
 
  0.998
Neut_0219
Histidine kinase; KEGG- neu-NE0049 sensory transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART- PAS domain containing protein (1221 aa)
           
  0.531
Neut_2375
PFAM- aminoglycoside phosphotransferase; KEGG- neu-NE0191 domain of unknown function DUF227 (332 aa)
 
          0.431
Neut_1249
PFAM- Di-haem cytochrome c peroxidase; KEGG- neu-NE1315 cytochrome c551 peroxidase (334 aa)
              0.418
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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