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Neut_1267 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1267" - Uncharacterized protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1267Uncharacterized protein; KEGG- neu-NE1390 serine/threonine specific protein phosphatase-Exonuclease SbcD (104 aa)    
Predicted Functional Partners:
Neut_1279
KEGG- noc-Noc_0704 ATP-dependent dsDNA exonuclease (SbcC) (63 aa)
 
 
  0.937
Neut_2425
PFAM- SMC domain protein; KEGG- noc-Noc_0704 ATP-dependent dsDNA exonuclease (SbcC) (1083 aa)
 
 
  0.936
Neut_0699
KEGG- neu-NE2001 hypothetical protein (208 aa)
   
          0.685
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
     
 
  0.626
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (343 aa)
   
 
  0.623
Neut_2545
PFAM- UvrD/REP helicase; KEGG- fnu-FN0524 DNA helicase II; Belongs to the helicase family. UvrD subfamily (971 aa)
   
 
  0.580
Neut_2523
TIGRFAM- ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG- neu-NE2564 ATP-dependent DNA helicase RecQ (539 aa)
   
 
  0.507
Neut_0543
TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- neu-NE2180 putative DNA polymerase III (delta’ subunit) protein (354 aa)
     
 
  0.495
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (608 aa)
     
 
  0.431
Neut_2181
PFAM- SNF2-related protein; helicase domain protein; SMART- DEAD/DEAH box helicase domain protein; KEGG- nha-Nham_2839 SNF2-related (897 aa)
     
 
  0.414
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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