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STRINGSTRING
Neut_1271 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1271" - KEGG: neu:NE1856 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1271KEGG- neu-NE1856 hypothetical protein (496 aa)    
Predicted Functional Partners:
Neut_0821
KEGG- neu-NE1917 hypothetical protein (100 aa)
   
          0.691
Neut_1270
Fructosamine kinase; PFAM- aminoglycoside phosphotransferase; fructosamine kinase; KEGG- neu-NE1855 hypothetical protein (301 aa)
 
        0.608
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
   
 
  0.573
Neut_0420
PFAM- response regulator receiver; KEGG- neu-NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL) (180 aa)
   
          0.525
Neut_0139
PFAM- PDZ/DHR/GLGF domain protein; KEGG- neu-NE0018 PDZ domain (also known as DHR or GLGF) (448 aa)
   
      0.505
Neut_1361
Periplasmic sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG- neu-NE1408 sensory transduction histidine kinases (445 aa)
   
      0.499
argH
TIGRFAM- argininosuccinate lyase; PFAM- fumarate lyase; KEGG- neu-NE1854 argininosuccinate lyase (461 aa)
              0.487
Neut_0727
KEGG- ecs-ECs5258 hypothetical protein (88 aa)
   
          0.437
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source (535 aa)
   
      0.433
Neut_0990
PFAM- short-chain dehydrogenase/reductase SDR; KEGG- neu-NE1215 short-chain dehydrogenase/reductase (SDR) superfamily (279 aa)
   
          0.431
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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