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Neut_1285 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1285" - TIGRFAM: hydrolase, TatD family in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1285TIGRFAM- hydrolase, TatD family; PFAM- TatD-related deoxyribonuclease; KEGG- neu-NE1516 uncharacterized protein family UPF0006 (254 aa)    
Predicted Functional Partners:
Neut_1284
PFAM- Ankyrin; KEGG- neu-NE1515 ankyrin-repeat (218 aa)
   
        0.889
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
 
 
  0.803
mltG
Endolytic murein transglycosylase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation (338 aa)
 
   
  0.787
Neut_1286
Uncharacterized protein; PFAM- 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG- neu-NE1517 6-pyruvoyl tetrahydropterin synthase (160 aa)
   
        0.670
Neut_0543
TIGRFAM- DNA polymerase III, delta prime subunit; KEGG- neu-NE2180 putative DNA polymerase III (delta’ subunit) protein (354 aa)
        0.616
tatC
Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (258 aa)
         
  0.556
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (256 aa)
 
   
  0.547
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (701 aa)
   
      0.532
Neut_1287
PFAM- Radical SAM domain protein; KEGG- neu-NE1518 hypothetical protein (286 aa)
   
        0.491
Neut_1912
PFAM- histidine triad (HIT) protein; KEGG- neu-NE0640 HIT (histidine triad) family (116 aa)
 
        0.486
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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