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STRINGSTRING
Neut_1287 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1287" - PFAM: Radical SAM domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1287PFAM- Radical SAM domain protein; KEGG- neu-NE1518 hypothetical protein (286 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
   
 
    0.921
Neut_0972
KEGG- nmu-Nmul_A1168 hypothetical protein (167 aa)
   
   
  0.768
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (432 aa)
 
            0.697
Neut_2279
KEGG- neu-NE0086 hypothetical protein (240 aa)
   
          0.688
Neut_0264
KEGG- neu-NE0179 hypothetical protein (228 aa)
   
          0.687
Neut_1286
Uncharacterized protein; PFAM- 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG- neu-NE1517 6-pyruvoyl tetrahydropterin synthase (160 aa)
              0.646
Neut_1678
KEGG- neu-NE1501 hypothetical protein (114 aa)
   
          0.640
Neut_1126
KEGG- neu-NE1841 hypothetical protein (150 aa)
   
          0.547
Neut_1411
PFAM- 4-oxalocrotonate tautomerase; KEGG- neu-NE0932 putative isomerase (62 aa)
   
          0.527
Neut_0659
PFAM- protein of unknown function DUF1058; KEGG- neu-NE2209 hypothetical protein (159 aa)
   
          0.502
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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