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STRINGSTRING
Neut_1337 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1337" - TIGRFAM: uncharacterized domain 1 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1337TIGRFAM- uncharacterized domain 1; PFAM- thioesterase superfamily protein; KEGG- neu-NE0832 DUF157 (159 aa)    
Predicted Functional Partners:
Neut_1336
KEGG- neu-NE0833 HrpA-like helicases; TIGRFAM- ATP-dependent helicase HrpA; PFAM- helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART- AAA ATPase; DEAD/DEAH box helicase domain protein (1253 aa)
     
      0.857
Neut_0724
PFAM- Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG- neu-NE1528 putative 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein (852 aa)
   
 
  0.784
Neut_1338
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) (369 aa)
              0.749
Neut_1822
PFAM- flagellar protein FlaG protein; KEGG- neu-NE1594 putative flagellar protein FlaG (119 aa)
     
        0.591
Neut_1097
KEGG- neu-NE0796 possible CapK protein (451 aa)
   
   
  0.589
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (701 aa)
   
      0.522
Neut_0285
TIGRFAM- 4-hydroxybenzoyl-CoA thioesterase; PFAM- thioesterase superfamily protein; KEGG- neu-NE0214 4-hydroxybenzoyl-CoA thioesterase family active site (137 aa)
   
   
  0.495
Neut_1339
PFAM- DNA mismatch repair protein MutS domain protein; KEGG- neu-NE0830 DNA mismatch repair protein MutS family, C-terminal domain (551 aa)
              0.465
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
   
        0.455
pcnB
Poly(A) polymerase I; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (462 aa)
     
      0.442
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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