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STRINGSTRING
Neut_1339 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1339" - PFAM: DNA mismatch repair protein MutS domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1339PFAM- DNA mismatch repair protein MutS domain protein; KEGG- neu-NE0830 DNA mismatch repair protein MutS family, C-terminal domain (551 aa)    
Predicted Functional Partners:
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (608 aa)
 
 
  0.847
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
   
 
  0.841
Neut_1669
KEGG- neu-NE2041 hypothetical protein (265 aa)
   
          0.744
Neut_2076
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit B; KEGG- neu-NE2062 ammonia monooxygenase, subunit B (421 aa)
   
          0.700
ABI60299.1
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit B; KEGG- neu-NE2062 ammonia monooxygenase, subunit B (421 aa)
   
          0.700
Neut_2077
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit A; KEGG- neu-NE2063 ammonia monooxygenase, subunit A (276 aa)
   
          0.683
ABI60300.1
PFAM- Ammonia monooxygenase/methane monooxygenase, subunit A; KEGG- neu-NE2063 ammonia monooxygenase, subunit A (276 aa)
   
          0.683
Neut_1793
KEGG- neu-NE2339 hydroxylamine oxidoreductase (570 aa)
   
          0.680
ABI60027.1
KEGG- neu-NE2339 hydroxylamine oxidoreductase (570 aa)
   
          0.680
Neut_1672
KEGG- neu-NE2339 hydroxylamine oxidoreductase (570 aa)
   
          0.680
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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