STRINGSTRING
Neut_1340 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1340" - Hypothetical protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1340Hypothetical protein (192 aa)    
Predicted Functional Partners:
Neut_1344
Hypothetical protein (399 aa)
              0.829
Neut_1343
Hypothetical protein (400 aa)
              0.829
Neut_1342
ABC transporter-like protein (223 aa)
              0.829
Neut_1341
RND family efflux transporter MFP subunit (384 aa)
              0.829
Neut_0895
ATPase AAA (277 aa)
   
          0.624
Neut_1339
DNA mismatch repair protein MutS domain-containing protein (551 aa)
              0.610
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA) (396 aa)
              0.529
Neut_0728
DNA internalization-related competence protein ComEC/Rec2 (799 aa)
              0.529
Neut_0629
Hypothetical protein (482 aa)
   
          0.511
Neut_1203
Biopolymer transport protein ExbD/TolR (144 aa)
 
          0.500
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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