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STRINGSTRING
Neut_1340 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1340" - KEGG: neu:NE0829 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1340KEGG- neu-NE0829 hypothetical protein (192 aa)    
Predicted Functional Partners:
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM- glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG- neu-NE1652 possible dolichol monophosphate mannose synthase (871 aa)
     
        0.863
Neut_1341
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0828 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (384 aa)
   
        0.822
Neut_1344
PFAM- protein of unknown function DUF214; KEGG- neu-NE0825 putative ABC transport system permease protein (399 aa)
              0.821
Neut_1343
PFAM- protein of unknown function DUF214; KEGG- neu-NE0826 putative ABC transport system permease protein (400 aa)
              0.821
Neut_1342
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0827 ATPase component ABC-type (unclassified) transport system (223 aa)
              0.821
Neut_1339
PFAM- DNA mismatch repair protein MutS domain protein; KEGG- neu-NE0830 DNA mismatch repair protein MutS family, C-terminal domain (551 aa)
              0.570
Neut_0902
KEGG- neu-NE1794 hypothetical protein (335 aa)
 
        0.526
Neut_1362
Two component transcriptional regulator, winged helix family; PFAM- response regulator receiver; transcriptional regulator domain protein; KEGG- neu-NE1409 possible response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain (228 aa)
     
        0.475
lpxK
Tetraacyldisaccharide 4’-kinase; Transfers the gamma-phosphate of ATP to the 4’-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4’-bis-phosphate (lipid IVA); In the C-terminal section; belongs to the UPF0434 family (396 aa)
              0.445
Neut_0728
TIGRFAM- DNA internalization-related competence protein ComEC/Rec2; PFAM- beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG- neu-NE2408 DNA internalization-related competence protein ComEC/Rec2 (799 aa)
              0.445
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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