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Neut_1380 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1380" - WD40 domain-containing protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1380WD40 domain-containing protein (369 aa)    
Predicted Functional Partners:
Neut_1379
Peptidase M28 (1132 aa)
          0.915
Neut_0938
WD40 domain-containing protein (346 aa)
 
 
  0.889
Neut_0290
OmpA/MotB domain-containing protein (173 aa)
 
 
  0.888
Neut_2508
OmpA/MotB domain-containing protein (231 aa)
   
 
  0.870
Neut_2403
OmpA/MotB domain-containing protein (220 aa)
   
 
  0.870
Neut_1053
Hypothetical protein (579 aa)
   
          0.682
Neut_1616
MotA/TolQ/ExbB proton channel (265 aa)
 
 
  0.658
Neut_0286
MotA/TolQ/ExbB proton channel (234 aa)
 
 
  0.655
Neut_0291
TPR repeat-containing protein (273 aa)
   
   
  0.652
Neut_1617
Biopolymer transport protein ExbD/TolR (141 aa)
 
   
  0.615
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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