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STRINGSTRING
Neut_1393 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1393" - PFAM: protein of unknown function DUF477 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1393PFAM- protein of unknown function DUF477; KEGG- neu-NE0915 hypothetical protein (294 aa)    
Predicted Functional Partners:
Neut_1394
PFAM- protein of unknown function DUF477; KEGG- neu-NE0916 hypothetical protein (167 aa)
 
          0.967
Neut_1392
PFAM- LemA family protein; KEGG- neu-NE0914 LemA protein (201 aa)
 
        0.965
Neut_1634
PFAM- alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG- neu-NE0772 bacterioferritin comigratory protein (151 aa)
     
        0.707
Neut_1050
PFAM- Redoxin domain protein; KEGG- neu-NE0780 hypothetical protein (185 aa)
     
        0.707
Neut_1540
PFAM- Rubredoxin-type Fe(Cys)4 protein; KEGG- neu-NE1426 rubredoxin-rubredoxin-type Fe(Cys)4 protein (62 aa)
   
        0.706
Neut_1873
KEGG- mca-MCA2128 hypothetical protein (364 aa)
     
        0.665
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family (252 aa)
     
        0.638
Neut_1391
PFAM- BolA family protein; KEGG- neu-NE0913 BolA-like protein; Belongs to the BolA/IbaG family (105 aa)
   
        0.615
Neut_1175
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG- neu-NE2303 uncharacterized NAD(FAD)-dependent dehydrogenase (507 aa)
   
        0.603
rpmI
PFAM- ribosomal protein L35; KEGG- neu-NE0956 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family (65 aa)
     
        0.552
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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