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Neut_1394 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1394" - PFAM: protein of unknown function DUF477 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1394PFAM- protein of unknown function DUF477; KEGG- neu-NE0916 hypothetical protein (167 aa)    
Predicted Functional Partners:
Neut_1393
PFAM- protein of unknown function DUF477; KEGG- neu-NE0915 hypothetical protein (294 aa)
 
          0.967
Neut_1392
PFAM- LemA family protein; KEGG- neu-NE0914 LemA protein (201 aa)
 
          0.944
Neut_1391
PFAM- BolA family protein; KEGG- neu-NE0913 BolA-like protein; Belongs to the BolA/IbaG family (105 aa)
              0.590
Neut_1091
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (367 aa)
              0.424
Neut_1396
KEGG- neu-NE0918 hypothetical protein (240 aa)
              0.416
Neut_1395
RNA polymerase, sigma-24 subunit, RpoE; PFAM- sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE0917 RNA polymerase sigma-70 factor (167 aa)
              0.416
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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