• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1398 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1398" - KEGG: neu:NE0920 hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1398KEGG- neu-NE0920 hypothetical protein (155 aa)    
Predicted Functional Partners:
Neut_1397
ABC transporter-related protein; PFAM- ABC transporter, transmembrane region; ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0919 ABC transporter, fused permease and ATPase domains (772 aa)
 
          0.966
Neut_1402
TIGRFAM- cyanophycin synthetase; PFAM- phosphoribosylglycinamide synthetase; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; RimK domain protein ATP-grasp; KEGG- neu-NE0923 cyanophycin synthetase (862 aa)
 
          0.839
Neut_1401
TIGRFAM- cyanophycin synthetase; PFAM- phosphoribosylglycinamide synthetase; Mur ligase, middle domain protein; RimK domain protein ATP-grasp; KEGG- neu-NE0922 putative cyanophycin synthetase (765 aa)
 
          0.837
Neut_1395
RNA polymerase, sigma-24 subunit, RpoE; PFAM- sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE0917 RNA polymerase sigma-70 factor (167 aa)
 
          0.645
Neut_0463
PFAM- zinc/iron permease; KEGG- neu-NE1653 ZIP zinc transporter (270 aa)
   
        0.596
Neut_1396
KEGG- neu-NE0918 hypothetical protein (240 aa)
              0.583
Neut_1149
KEGG- neu-NE0690 possible transmembrane protein (798 aa)
   
          0.492
Neut_0198
TIGRFAM- type I secretion outer membrane protein, TolC family; PFAM- outer membrane efflux protein; KEGG- neu-NE0036 outer membrane efflux protein (440 aa)
   
 
      0.462
Neut_0711
KEGG- neu-NE1542 hypothetical protein (248 aa)
   
          0.431
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (8%) [HD]