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Neut_1404 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1404" - PFAM: cytochrome c, class I in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1404PFAM- cytochrome c, class I; KEGG- neu-NE0925 cytochrome c, class IC-cytochrome c, class I (127 aa)    
Predicted Functional Partners:
Neut_1405
PFAM- cytochrome c, class I; KEGG- neu-NE0926 cytochrome c, class I (232 aa)
 
          0.967
Neut_1403
PFAM- multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG- neu-NE0924 multicopper oxidase type 1 (314 aa)
 
          0.906
Neut_1406
PFAM- multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG- neu-NE0927 multicopper oxidase type 1 (353 aa)
 
          0.885
Neut_0385
KEGG- neu-NE1977 putative transmembrane protein (63 aa)
   
          0.613
Neut_2463
KEGG- neu-NE1274 cytochrome c, class I (310 aa)
 
 
 
  0.530
Neut_0178
KEGG- neu-NE0494 hypothetical protein (111 aa)
   
          0.518
Neut_0723
KEGG- neu-NE1529 possible signal peptide protein (165 aa)
   
 
      0.506
Neut_2219
CRISPR-associated protein, Csm4 family; KEGG- neu-NE0120 hypothetical protein (322 aa)
   
          0.502
Neut_1875
PFAM- cytochrome c oxidase, subunit I; KEGG- neu-NE0683 cytochrome c oxidase, subunit I (492 aa)
   
      0.489
Neut_2225
TIGRFAM- CRISPR-associated protein, NE0113 family; KEGG- neu-NE0113 hypothetical protein (376 aa)
   
          0.481
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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