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Neut_1416 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1416" - Two component, sigma54 specific, transcriptional regulator, Fis family protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Neut_1416Two component, sigma54 specific, transcriptional regulator, Fis family protein; PFAM- response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART- AAA ATPase; KEGG- neu-NE1124 response regulatory protein (452 aa)    
Predicted Functional Partners:
Neut_1417
PFAM- AMP-dependent synthetase and ligase; KEGG- neu-NE1125 AMP-dependent synthetase and ligase (529 aa)
 
          0.790
Neut_1418
PFAM- Orn/DAP/Arg decarboxylase 2; KEGG- neu-NE1126 Orn/DAP/Arg decarboxylases family 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family (411 aa)
 
        0.753
Neut_2303
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
 
     
  0.748
Neut_1763
Periplasmic sensor signal transduction histidine kinase; PFAM- ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG- neu-NE0377 sensory transduction histidine kinase (693 aa)
 
 
  0.717
Neut_1162
CheA signal transduction histidine kinases; PFAM- response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG- neu-NE1250 two-component hybrid sensor and regulator (1716 aa)
   
   
  0.663
Neut_0219
Histidine kinase; KEGG- neu-NE0049 sensory transduction histidine kinase; TIGRFAM- PAS sensor protein; PFAM- response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART- PAS domain containing protein (1221 aa)
         
  0.637
Neut_0896
PFAM- polysaccharide deacetylase; KEGG- neu-NE1800 polysaccharide deacetylase (279 aa)
   
          0.612
Neut_2072
PFAM- TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART- Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG- neu-NE1444 TPR repeat (930 aa)
 
 
  0.606
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
         
  0.573
Neut_1419
PFAM- asparagine synthase; KEGG- neu-NE1127 asparagine synthase (615 aa)
 
          0.559
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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