STRINGSTRING
Neut_1423 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1423" - Hypothetical protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1423Hypothetical protein (79 aa)    
Predicted Functional Partners:
Neut_1424
Hypothetical protein (408 aa)
 
          0.967
Neut_1425
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (984 aa)
 
          0.947
Neut_1420
Hypothetical protein (270 aa)
   
          0.716
Neut_0626
Hypothetical protein (255 aa)
   
          0.568
Neut_1793
Hydroxylamine oxidase (570 aa)
   
          0.499
Neut_1793
Hydroxylamine oxidase (570 aa)
   
          0.499
Neut_1672
Hydroxylamine oxidase (570 aa)
   
          0.499
Neut_0439
Hypothetical protein (85 aa)
   
          0.427
lptE
Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
   
          0.412
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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