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STRINGSTRING
Neut_1442 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1442" - PFAM: extracellular solute-binding protein, family 5 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1442PFAM- extracellular solute-binding protein, family 5; KEGG- neu-NE1152 bacterial extracellular solute-binding protein, family 5 (714 aa)    
Predicted Functional Partners:
Neut_1443
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- neu-NE1153 oligopeptide ABC transporter (325 aa)
 
 
  0.989
Neut_2440
PFAM- binding-protein-dependent transport systems inner membrane component; KEGG- neu-NE2479 oligopeptide ABC transporter (497 aa)
 
 
  0.936
Neut_2441
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG- neu-NE2480 ATPase component ABC-type dipeptide/oligopeptide/nickel transport system; TIGRFAM- oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM- ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART- AAA ATPase; Belongs to the ABC transporter superfamily (685 aa)
 
   
  0.888
Neut_1379
Peptidase M28; PFAM- PDZ/DHR/GLGF domain protein; peptidase M28; KEGG- neu-NE0901 PDZ domain (also known as DHR or GLGF) (1132 aa)
 
   
  0.730
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
         
  0.703
Neut_1446
KEGG- neu-NE1156 bacterial regulatory proteins, MerR family (101 aa)
 
          0.603
Neut_2433
PFAM- ROK family protein; phosphoglucose isomerase (PGI); KEGG- dra-DR1742 glucose-6-phosphate isomerase; Belongs to the GPI family (768 aa)
         
  0.567
Neut_1445
PFAM- heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG- neu-NE1155 DnaJ N-terminal domain-DnaJ C terminal domain (314 aa)
 
     
  0.528
Neut_1444
TIGRFAM- diguanylate cyclase; PFAM- GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG- neu-NE1154 domain of unknown function, DUF9-HAMP domain (551 aa)
              0.524
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
     
      0.508
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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