• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1444 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1444" - TIGRFAM: diguanylate cyclase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1444TIGRFAM- diguanylate cyclase; PFAM- GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG- neu-NE1154 domain of unknown function, DUF9-HAMP domain (551 aa)    
Predicted Functional Partners:
Neut_2285
TIGRFAM- diguanylate cyclase; PFAM- GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG- neu-NE0080 diguanylate cyclase/phosphodiesterase domain 2 (EAL) (574 aa)
 
  0.874
Neut_1019
PFAM- EAL domain protein; response regulator receiver; KEGG- neu-NE0566 domain of unknown function 2-response regulator receiver domain (415 aa)
 
  0.824
Neut_1199
Diguanylate phosphodiesterase; PFAM- EAL domain protein; PAS fold-4 domain protein; KEGG- neu-NE0865 PAS domain-domain of unknown function 2 (507 aa)
 
  0.797
Neut_2201
PFAM- metal-dependent phosphohydrolase, HD sub domain; SMART- metal-dependent phosphohydrolase, HD region; KEGG- dar-Daro_2274 metal-dependent phosphohydrolase, HD subdomain (435 aa)
 
  0.760
Neut_1446
KEGG- neu-NE1156 bacterial regulatory proteins, MerR family (101 aa)
   
      0.739
Neut_1445
PFAM- heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG- neu-NE1155 DnaJ N-terminal domain-DnaJ C terminal domain (314 aa)
   
   
  0.695
Neut_1162
CheA signal transduction histidine kinases; PFAM- response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG- neu-NE1250 two-component hybrid sensor and regulator (1716 aa)
   
 
  0.677
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
         
  0.676
Neut_1824
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (491 aa)
       
 
  0.654
Neut_0422
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); KEGG- neu-NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL); TIGRFAM- PAS sensor protein; diguanylate cyclase; PFAM- GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-3 domain protein; SMART- PAS domain containing protein; PAC repeat-containing protein (791 aa)
 
 
0.624
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (8%) [HD]