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Neut_1474 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1474" - PFAM: HNH endonuclease in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1474PFAM- HNH endonuclease; SMART- HNH nuclease; KEGG- ppu-PP3883 phage holin, putative (134 aa)    
Predicted Functional Partners:
Neut_1471
TIGRFAM- phage portal protein, HK97 family; PFAM- phage portal protein; KEGG- ppr-PBPRB1288 hypothetical phage portal protein (430 aa)
 
     
  0.910
Neut_1472
PFAM- phage Terminase; KEGG- ppu-PP3881 phage terminase, large subunit, putative (557 aa)
 
     
  0.909
Neut_1473
TIGRFAM- phage terminase, small subunit, putative, P27 family; KEGG- ppu-PP3882 phage terminase, small subunit, putative (154 aa)
 
          0.899
Neut_1469
TIGRFAM- phage major capsid protein, HK97 family; PFAM- phage major capsid protein, HK97; KEGG- dvu-DVU1500 major capsid protein, HK97 family (408 aa)
 
          0.861
Neut_1475
annotation not available (92 aa)
              0.845
Neut_1470
ATP-dependent Clp protease proteolytic subunit; PFAM- peptidase S14, ClpP; KEGG- dvu-DVU1501 ClpP protease family protein; Belongs to the peptidase S14 family (228 aa)
 
          0.802
Neut_1466
PFAM- phage head-tail adaptor, putative; KEGG- eba-ebA5483 phage related protein (head-tail adaptor) (111 aa)
 
          0.792
lysS
Lysine--tRNA ligase; TIGRFAM- lysyl-tRNA synthetase; PFAM- tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG- neu-NE2355 putative lysyl-tRNA synthetase protein; Belongs to the class-II aminoacyl-tRNA synthetase family (532 aa)
     
 
  0.752
Neut_1464
KEGG- ppu-PP1572 hypothetical protein (120 aa)
 
          0.750
Neut_1463
KEGG- ppu-PP1573 major tail protein, putative (238 aa)
 
          0.748
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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