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STRINGSTRING
Neut_1478 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1478" - PFAM: virulence-associated E family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1478PFAM- virulence-associated E family protein; KEGG- pfl-PFL_1989 DNA primase domain protein (408 aa)    
Predicted Functional Partners:
Neut_1474
PFAM- HNH endonuclease; SMART- HNH nuclease; KEGG- ppu-PP3883 phage holin, putative (134 aa)
 
          0.444
Neut_1477
annotation not available (79 aa)
              0.413
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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