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STRINGSTRING
Neut_1480 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1480" - PFAM: protein of unknown function DUF891 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1480PFAM- protein of unknown function DUF891; KEGG- eba-ebA3772 hypothetical protein (105 aa)    
Predicted Functional Partners:
Neut_1481
Transcriptional regulator, XRE family protein; SMART- helix-turn-helix domain protein; KEGG- neu-NE1372 helix-turn-helix motif (92 aa)
 
   
  0.972
Neut_1999
PFAM- protein of unknown function DUF497; KEGG- noc-Noc_1098 protein of unknown function DUF497 (113 aa)
   
        0.534
Neut_2415
PFAM- filamentation induced by cAMP protein Fic; KEGG- cch-Cag_0831 regulatory proteins, AsnC family (369 aa)
   
          0.424
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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