STRINGSTRING
Neut_1485 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1485" - SppA protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1485SppA protein (325 aa)    
Predicted Functional Partners:
Neut_2218
CRISPR-associated RAMP Csm3 family protein (238 aa)
   
          0.718
Neut_1484
Putative phage repressor (344 aa)
              0.625
Neut_2216
CRISPR-associated Csm1 family protein (872 aa)
   
          0.564
Neut_0778
DNA polymerase I (906 aa)
   
   
  0.543
Neut_2071
Cysteine synthase B (292 aa)
       
      0.510
Neut_1734
Pyridoxal-5’-phosphate-dependent protein subunit beta (647 aa)
       
      0.510
Neut_2219
Hypothetical protein (322 aa)
   
          0.501
Neut_1488
Hypothetical protein (136 aa)
              0.500
Neut_1487
Hypothetical protein (182 aa)
              0.500
Neut_1486
Hypothetical protein (134 aa)
              0.500
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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