Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein; KEGG- dge-Dgeo_0927 type III restriction system methylase (166 aa)
Predicted Functional Partners:
PFAM- phage integrase family protein; KEGG- psb-Psyr_2846 phage integrase-phage integrase, N-terminal SAM-like; Belongs to the ’phage’ integrase family (341 aa)
annotation not available (127 aa)
annotation not available (120 aa)
annotation not available (160 aa)
annotation not available (94 aa)
Farnesyl-diphosphate synthase; PFAM- Polyprenyl synthetase; KEGG- neu-NE1160 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family (297 aa)
Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (103 aa)
Your Current Organism:
NCBI taxonomy Id: 335283 Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91