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xseB protein (Nitrosomonas eutropha) - STRING interaction network
"xseB" - Exodeoxyribonuclease 7 small subunit in Nitrosomonas eutropha
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
xseBExodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family (103 aa)    
Predicted Functional Partners:
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family (448 aa)
 
  0.997
Neut_1500
Farnesyl-diphosphate synthase; PFAM- Polyprenyl synthetase; KEGG- neu-NE1160 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family (297 aa)
   
   
  0.985
Neut_0825
Farnesyltranstransferase; PFAM- Polyprenyl synthetase; KEGG- neu-NE1915 polyprenyl synthetase; Belongs to the FPP/GGPP synthase family (322 aa)
   
   
  0.877
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily (614 aa)
   
   
  0.781
folE2
GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate (267 aa)
              0.604
Neut_0728
TIGRFAM- DNA internalization-related competence protein ComEC/Rec2; PFAM- beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG- neu-NE2408 DNA internalization-related competence protein ComEC/Rec2 (799 aa)
 
     
  0.507
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (685 aa)
         
  0.457
Neut_0131
Exonuclease RecJ; TIGRFAM- single-stranded-DNA-specific exonuclease RecJ; PFAM- phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG- neu-NE0010 single-stranded-DNA-specific exonuclease (589 aa)
 
     
  0.455
argA
TIGRFAM- amino-acid N-acetyltransferase; PFAM- GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG- neu-NE0778 GCN5-related N-acetyltransferase-aspartokinase superfamily; Belongs to the acetyltransferase family. ArgA subfamily (444 aa)
         
  0.446
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (369 aa)
              0.445
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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