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STRINGSTRING
Neut_1508 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1508" - PFAM: VacJ family lipoprotein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1508PFAM- VacJ family lipoprotein; KEGG- neu-NE1169 possible lipoprotein precursor (VacJ) transmembrane (282 aa)    
Predicted Functional Partners:
Neut_0854
PFAM- toluene tolerance family protein; KEGG- neu-NE2381 putative signal peptide protein (205 aa)
 
 
  0.836
Neut_1574
PFAM- toluene tolerance family protein; KEGG- neu-NE0331 putative periplasmic transport protein (193 aa)
 
 
  0.745
Neut_0853
PFAM- Mammalian cell entry related domain protein; KEGG- neu-NE2382 mce related protein (159 aa)
 
     
  0.733
Neut_1509
PFAM- MotA/TolQ/ExbB proton channel; KEGG- neu-NE1171 MotA/TolQ/ExbB proton channel family (202 aa)
     
      0.543
Neut_1507
Squalene-hopene cyclase; KEGG- neu-NE1168 prenyltransferase and squalene oxidase repeats; TIGRFAM- squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM- Prenyltransferase/squalene oxidase (670 aa)
              0.528
Neut_1506
PFAM- purine and other phosphorylases, family 1; KEGG- neu-NE1167 purine and other phosphorylase, family 1 (247 aa)
              0.528
Neut_0732
PFAM- NlpBDapX family lipoprotein; KEGG- neu-NE2404 putative transmembrane protein (386 aa)
     
      0.442
Neut_2522
PFAM- porin, Gram-negative type; KEGG- neu-NE2563 general diffusion gram-negative porins (413 aa)
       
      0.441
Neut_1424
KEGG- neu-NE1130 hypothetical protein (408 aa)
       
      0.441
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (625 aa)
   
        0.406
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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