STRINGSTRING
Neut_1512 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1512" - Putative RNA methylase in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1512Putative RNA methylase (394 aa)    
Predicted Functional Partners:
dsbB
Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein (162 aa)
              0.849
Neut_1511
Hypothetical protein (126 aa)
              0.665
Neut_1653
ABC transporter-like protein (648 aa)
 
   
  0.601
Neut_0890
Putative ABC transporter ATP-binding protein (555 aa)
 
   
  0.573
xseA
Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (448 aa)
              0.517
Neut_0315
ABC transporter-like protein (637 aa)
   
   
  0.491
Neut_1230
RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (342 aa)
   
 
  0.464
Neut_0498
Ribonuclease II (619 aa)
 
 
      0.456
Neut_1514
Endoribonuclease L-PSP (131 aa)
              0.451
Neut_1754
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (449 aa)
 
        0.449
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]