• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1530 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1530" - PFAM: peptidase M16 domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1530PFAM- peptidase M16 domain protein; KEGG- neu-NE1416 insulinase family (peptidase family M16) (463 aa)    
Predicted Functional Partners:
Neut_2343
PFAM- peptidase M16 domain protein; KEGG- neu-NE0970 insulinase family (peptidase family M16) (433 aa)
   
0.959
Neut_1112
PFAM- cytochrome c1; KEGG- neu-NE0811 cytochrome c1 (234 aa)
     
 
  0.898
Neut_1110
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (201 aa)
     
 
  0.890
Neut_0927
NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain; Belongs to the complex I 51 kDa subunit family (425 aa)
     
 
  0.863
Neut_0928
TIGRFAM- NADH-quinone oxidoreductase, chain G; PFAM- ferredoxin; molybdopterin oxidoreductase; KEGG- neu-NE1771 ferredoxin-prokaryotic molybdopterin oxidoreductases (801 aa)
     
 
  0.827
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family (178 aa)
     
 
  0.815
Neut_0459
PFAM- NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG- neu-NE1657 hypothetical protein (307 aa)
     
 
  0.814
nuoD
NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family (417 aa)
     
 
  0.809
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (345 aa)
   
        0.731
Neut_2014
PFAM- H+-transporting two-sector ATPase, delta/epsilon subunit; KEGG- sat-SYN_02098 F0F1-type ATP synthase, epsilon subunit (136 aa)
     
 
  0.710
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (10%) [HD]