STRINGSTRING
Neut_1536 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1536" - VacJ family lipoprotein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1536VacJ family lipoprotein (259 aa)    
Predicted Functional Partners:
Neut_0854
Toluene tolerance family protein (205 aa)
 
   
  0.872
Neut_0853
Hypothetical protein (159 aa)
 
     
  0.851
Neut_1574
Toluene tolerance family protein (193 aa)
 
          0.628
hemL
Glutamate-1-semialdehyde aminotransferase (427 aa)
              0.535
Neut_2235
ABC transporter-like protein (260 aa)
         
  0.478
Neut_0851
ABC transporter-like protein (271 aa)
         
  0.478
Neut_2236
Hypothetical protein (381 aa)
         
  0.475
Neut_0852
Hypothetical protein (265 aa)
         
  0.475
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) (212 aa)
              0.469
Neut_1539
Phosphomethylpyrimidine kinase (280 aa)
              0.464
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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