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STRINGSTRING
Neut_1540 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1540" - PFAM: Rubredoxin-type Fe(Cys)4 protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1540PFAM- Rubredoxin-type Fe(Cys)4 protein; KEGG- neu-NE1426 rubredoxin-rubredoxin-type Fe(Cys)4 protein (62 aa)    
Predicted Functional Partners:
Neut_1175
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG- neu-NE2303 uncharacterized NAD(FAD)-dependent dehydrogenase (507 aa)
 
 
  0.901
Neut_1534
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- neu-NE1420 probable rubredoxin reductase (384 aa)
     
  0.878
Neut_1541
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (129 aa)
   
   
  0.866
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
         
  0.749
thiE
Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP); Belongs to the thiamine-phosphate synthase family (212 aa)
              0.730
coq7
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol; Belongs to the COQ7 family (208 aa)
           
  0.723
Neut_1393
PFAM- protein of unknown function DUF477; KEGG- neu-NE0915 hypothetical protein (294 aa)
   
        0.706
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (356 aa)
     
   
  0.676
hemL
TIGRFAM- glutamate-1-semialdehyde-2,1-aminomutase; PFAM- aminotransferase class-III; KEGG- neu-NE1423 glutamate-1-semialdehyde 2,1-aminomutase protein (427 aa)
              0.674
Neut_1521
PFAM- Di-haem cytochrome c peroxidase; KEGG- aae-aq_136 cytochrome c peroxidase (309 aa)
           
  0.664
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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