• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_1584 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1584" - PFAM: cytochrome c, class I in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1584PFAM- cytochrome c, class I; KEGG- rfr-Rfer_4125 cytochrome c, class I (203 aa)    
Predicted Functional Partners:
Neut_1583
PFAM- cytochrome C oxidase, mono-heme subunit/FixO; KEGG- pol-Bpro_1266 cytochrome c oxidase, mono-heme subunit/FixO (202 aa)
   
  0.976
Neut_1582
PFAM- cytochrome c oxidase, subunit I; KEGG- rfr-Rfer_4127 cytochrome c oxidase, subunit I (552 aa)
 
 
  0.939
Neut_1403
PFAM- multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG- neu-NE0924 multicopper oxidase type 1 (314 aa)
 
            0.899
Neut_1585
KEGG- rfr-Rfer_4124 uncharacterized protein SCO1/SenC/PrrC,involved in biogenesis of respiratory and photosynthetic systems (216 aa)
 
          0.844
Neut_2395
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (280 aa)
 
 
      0.781
Neut_0305
PFAM- cytochrome c, class I; KEGG- neu-NE0273 cytochrome c, class IC-cytochrome c, class I (211 aa)
 
          0.759
Neut_1586
KEGG- rfr-Rfer_4123 hypothetical protein (163 aa)
 
          0.646
Neut_2392
PFAM- cytochrome c oxidase, subunit III; KEGG- neu-NE1013 cytochrome c oxidase, subunit III (281 aa)
   
 
  0.550
Neut_0520
Nitric oxide reductase, NorB subunit apoprotein; PFAM- cytochrome c oxidase, subunit I; KEGG- neu-NE2004 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family (448 aa)
     
 
  0.459
Neut_2073
TIGRFAM- competence protein ComEA helix-hairpin-helix repeat protein; PFAM- helix-hairpin-helix motif; KEGG- neu-NE0940 putative DNA transport competence protein, ComEA (94 aa)
       
 
  0.458
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (10%) [HD]