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Neut_1614 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1614" - TIGRFAM: ribonuclease, Rne/Rng family in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Neut_1614TIGRFAM- ribonuclease, Rne/Rng family; PFAM- RNA binding S1 domain protein; KEGG- neu-NE0355 S1 RNA binding domain-ribonuclease E and G (483 aa)    
Predicted Functional Partners:
Neut_1613
Maf-like protein Neut_1613; TIGRFAM- maf protein; PFAM- Maf family protein; KEGG- neu-NE0356 Maf-like protein (207 aa)
 
   
  0.866
rlmH
Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family (155 aa)
              0.672
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (705 aa)
   
 
  0.652
eno
Enolase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family (428 aa)
       
 
  0.607
rsfS
Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (121 aa)
   
        0.583
nadD
Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (231 aa)
              0.572
pcnB
Poly(A) polymerase I; Adds poly(A) tail to the 3’ end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control (462 aa)
   
 
  0.499
dnaK
Chaperone protein DnaK; Acts as a chaperone (647 aa)
     
 
  0.494
Neut_1668
PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG- neu-NE2040 ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family (488 aa)
     
 
  0.491
Neut_0889
PFAM- helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG- neu-NE1807 putative ATP-dependent RNA helicase protein; Belongs to the DEAD box helicase family (455 aa)
     
 
  0.491
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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