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STRINGSTRING
Neut_1617 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1617" - PFAM: Biopolymer transport protein ExbD/TolR in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Neut_1617PFAM- Biopolymer transport protein ExbD/TolR; KEGG- neu-NE0352 biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1 (141 aa)    
Predicted Functional Partners:
Neut_1616
Outer membrane transport energization protein ExbB; PFAM- MotA/TolQ/ExbB proton channel; KEGG- neu-NE0353 MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1 (265 aa)
 
  0.994
Neut_1615
Outer membrane transport energization protein TonB; TIGRFAM- TonB family protein; PFAM- Gram-negative tonB protein; KEGG- neu-NE0354 possible TonB protein; TC 2.C.1.1.1 (240 aa)
 
 
  0.972
Neut_0286
Cell division and transport-associated protein TolQ; PFAM- MotA/TolQ/ExbB proton channel; KEGG- neu-NE0215 MotA/TolQ/ExbB proton channel family; TC 2.C.1.2.1 (234 aa)
 
 
  0.959
Neut_0290
PFAM- OmpA/MotB domain protein; KEGG- neu-NE0219 bacterial outer membrane protein; Belongs to the ompA family (173 aa)
 
 
  0.781
tolB
Protein TolB; Involved in the TonB-independent uptake of proteins (423 aa)
 
 
  0.762
Neut_1509
PFAM- MotA/TolQ/ExbB proton channel; KEGG- neu-NE1171 MotA/TolQ/ExbB proton channel family (202 aa)
 
 
  0.718
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (369 aa)
         
  0.651
Neut_0497
TIGRFAM- TonB family protein; KEGG- neu-NE1626 putative TonB protein (276 aa)
   
 
  0.634
Neut_0288
Cell division and transport-associated protein TolA; KEGG- neu-NE0217 proline-rich region; TC 2.C.1.2.1 (298 aa)
   
 
  0.558
bamA
Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (758 aa)
   
          0.558
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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