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STRINGSTRING
Neut_1630 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1630" - PFAM: major facilitator superfamily MFS_1 in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1630PFAM- major facilitator superfamily MFS_1; KEGG- neu-NE0600 probable transmembrane protein (446 aa)    
Predicted Functional Partners:
Neut_0389
KEGG- neu-NE1973 possible proline rich signal peptide protein (201 aa)
   
          0.748
Neut_0396
KEGG- neu-NE1966 DNA topoisomerase III protein; TIGRFAM- DNA topoisomerase III; PFAM- TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; SMART- DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein (832 aa)
   
        0.645
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (419 aa)
   
 
  0.621
zapD
Cell division protein ZapD; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity (251 aa)
   
          0.584
priB
Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS) (102 aa)
   
          0.566
Neut_0498
PFAM- ribonuclease II; KEGG- neu-NE1625 ribonuclease II domain (619 aa)
 
          0.548
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (164 aa)
   
          0.524
Neut_2026
PFAM- outer membrane chaperone Skp (OmpH); KEGG- neu-NE1709 putative transmembrane protein; Belongs to the skp family (187 aa)
   
          0.512
Neut_2284
KEGG- neu-NE0081 possible transmembrane protein (239 aa)
   
          0.455
flhD
Flagellar transcriptional regulator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family (105 aa)
   
          0.435
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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