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Neut_1661 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1661" - ABC transporter-related protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1661ABC transporter-related protein; PFAM- ABC transporter, transmembrane region; ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0720 ABC transporter, fused permease and ATPase domains (596 aa)    
Predicted Functional Partners:
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (298 aa)
              0.574
Neut_1662
PFAM- protein of unknown function UPF0102; KEGG- neu-NE0711 hypothetical protein; Belongs to the UPF0102 family (116 aa)
              0.563
Neut_0829
TIGRFAM- glutaredoxin-like protein; PFAM- glutaredoxin; KEGG- neu-NE1911 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily (102 aa)
   
          0.523
dnaK
Chaperone protein DnaK; Acts as a chaperone (647 aa)
   
 
 
  0.518
Neut_0858
PFAM- BolA family protein; KEGG- neu-NE2377 BolA-like protein; Belongs to the BolA/IbaG family (84 aa)
   
          0.493
Neut_1549
N-acetylneuraminate synthase; PFAM- CBS domain containing protein; Xylose isomerase domain protein TIM barrel; N-acetylneuraminic acid synthase, N-terminal domain; KEGG- neu-NE1570 type III antifreeze protein-CBS domain-NeuB family (749 aa)
 
 
  0.482
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate (345 aa)
              0.410
thrS
Threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction- L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also edits incorrectly charged L-seryl-tRNA(Thr) (635 aa)
   
        0.409
leuS
Leucine--tRNA ligase; TIGRFAM- leucyl-tRNA synthetase; KEGG- neu-NE1139 t-RNA synthetase, class Ia-leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (868 aa)
   
      0.405
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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