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STRINGSTRING
Neut_1727 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1727" - PFAM: PepSY-associated TM helix domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1727PFAM- PepSY-associated TM helix domain protein; KEGG- neu-NE0537 hypothetical protein (414 aa)    
Predicted Functional Partners:
Neut_1741
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ppu-PP3575 outer membrane ferric siderophore receptor (709 aa)
 
        0.607
Neut_1732
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ava-Ava_B0148 TonB-dependent siderophore receptor (670 aa)
 
   
  0.575
Neut_1730
KEGG- neu-NE0538 outer membrane efflux protein (140 aa)
 
          0.567
Neut_2091
PFAM- FecR protein; KEGG- neu-NE2139 putative transmembrane sensor (320 aa)
 
     
  0.536
Neut_0374
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE2124 TonB-dependent receptor protein (736 aa)
 
        0.500
Neut_1729
annotation not available (46 aa)
              0.476
Neut_1728
KEGG- neu-NE0538 outer membrane efflux protein (77 aa)
              0.476
Neut_0721
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1531 TonB-dependent receptor protein (709 aa)
 
     
  0.417
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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