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Neut_1730 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1730" - KEGG: neu:NE0538 outer membrane efflux protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1730KEGG- neu-NE0538 outer membrane efflux protein (140 aa)    
Predicted Functional Partners:
Neut_1729
annotation not available (46 aa)
              0.757
Neut_1728
KEGG- neu-NE0538 outer membrane efflux protein (77 aa)
              0.757
Neut_1945
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- sat-SYN_00851 type I secretion outer membrane protein (493 aa)
   
          0.745
Neut_1731
KEGG- neu-NE0538 outer membrane efflux protein (37 aa)
              0.671
Neut_1727
PFAM- PepSY-associated TM helix domain protein; KEGG- neu-NE0537 hypothetical protein (414 aa)
 
          0.567
Neut_2159
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0169 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (401 aa)
   
      0.560
Neut_0940
KEGG- neu-NE1759 hypothetical protein (880 aa)
   
 
  0.557
Neut_1946
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- dde-Dde_0402 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (354 aa)
   
      0.529
Neut_2160
TIGRFAM- transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM- acriflavin resistance protein; KEGG- neu-NE0168 multidrug resistance protein MexB (1064 aa)
   
 
  0.525
Neut_1947
TIGRFAM- transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM- acriflavin resistance protein; KEGG- noc-Noc_1130 hydrophobe/amphiphile efflux-1 HAE1 (954 aa)
   
 
  0.515
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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