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Neut_1732 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1732" - TIGRFAM: TonB-dependent siderophore receptor in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Neut_1732TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ava-Ava_B0148 TonB-dependent siderophore receptor (670 aa)    
Predicted Functional Partners:
Neut_1740
PFAM- PepSY-associated TM helix domain protein; KEGG- bja-blr4505 hypothetical protein (402 aa)
 
   
  0.595
Neut_1727
PFAM- PepSY-associated TM helix domain protein; KEGG- neu-NE0537 hypothetical protein (414 aa)
 
   
  0.575
Neut_0721
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1531 TonB-dependent receptor protein (709 aa)
   
     
  0.548
Neut_1733
PFAM- Methyltransferase type 11; Methyltransferase type 12; KEGG- sha-SH0146 hypothetical protein (225 aa)
   
        0.496
Neut_2092
PFAM- TonB-dependent receptor; Secretin/TonB, short N-terminal domain; TonB-dependent receptor, plug; KEGG- neu-NE2140 TonB-dependent receptor protein (765 aa)
   
     
  0.468
Neut_2091
PFAM- FecR protein; KEGG- neu-NE2139 putative transmembrane sensor (320 aa)
 
   
  0.443
Neut_1741
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ppu-PP3575 outer membrane ferric siderophore receptor (709 aa)
 
   
0.413
Neut_2090
RNA polymerase, sigma-24 subunit, RpoE; PFAM- sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG- neu-NE2138 sigma factor, ECF subfamily (169 aa)
   
   
  0.407
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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