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STRINGSTRING
Neut_1740 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1740" - PFAM: PepSY-associated TM helix domain protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1740PFAM- PepSY-associated TM helix domain protein; KEGG- bja-blr4505 hypothetical protein (402 aa)    
Predicted Functional Partners:
Neut_1741
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ppu-PP3575 outer membrane ferric siderophore receptor (709 aa)
 
        0.938
Neut_1743
PFAM- IucA/IucC family protein; KEGG- tbd-Tbd_0718 iron transporter (604 aa)
   
        0.607
Neut_1732
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- ava-Ava_B0148 TonB-dependent siderophore receptor (670 aa)
 
   
  0.595
Neut_1744
PFAM- major facilitator superfamily MFS_1; KEGG- pol-Bpro_4784 major facilitator superfamily MFS_1 (390 aa)
              0.595
Neut_1742
PFAM- Orn/DAP/Arg decarboxylase 2; KEGG- pol-Bpro_4782 Orn/DAP/Arg decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family (400 aa)
              0.595
Neut_1745
PFAM- IucA/IucC family protein; KEGG- sas-SAS0095 putative siderophore biosynthesis protein (603 aa)
   
        0.520
Neut_1962
TIGRFAM- TonB-dependent siderophore receptor; PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- tbd-Tbd_0715 TonB-dependent siderophore receptor (701 aa)
 
   
  0.479
Neut_2038
PFAM- TonB-dependent receptor; TonB-dependent receptor, plug; KEGG- neu-NE1721 putative iron complex outermembrane recepter protein (670 aa)
 
          0.451
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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